I came across a thread the other day, and I'm pretty sure it was the user HiFiSi that had posted a couple of pictures on how to fix problems with engine whining and other noises. The pictures showed someone wrapping the connections of the RCA inputs and grounding them on the AVIC-D3 unit itself, using some sort of washer and a metal pin. They also tied all of the copper wires together to make one single connection to ground.
The only thing I came up with upon searching for it was a link to this:
http://www.caraudio.com/forum/showthread.php?t=147694
For the life of me I cannot find this thread after searching high and low. Can anyone direct me to the this thread? Also, my apologies HiFiSi if you weren't the one to post this. For some reason I remember seeing you're username in the the thread.