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Did you think that those wires were optional?
The RED wire goes to the wire labeled "Accessory" on your vehicle harnass. Since you didn't hook it up, its safe to assume you know dick-all about radios so take notes.
The GREEN wire needs to be either hooked up to the parking brake or grounded out if you're going to proceed with the software or hardware bypass
The PINK wire needs to be hooked up to the vehicles VSS which may be on the vehicle harnass or might be tucked away in some pain-in-the-ass location; this is vehicle specific so you'll need to google for the answer
The PURPLE wire needs to be run to the trunk to be tied in with the +12v reverse light; this is optional if you don't plan on setting up a backup camera.
The YELLOW wire needs to be hooked up to a constant +12v source. Make sure you don't reverse the roles of the YELLOW and RED wires; this is important!
There are two BLUE wires; one goes to your radio antenna amplifier if your vehicle has one, the other supplies power to your amps if you have any.